| QTL Map Information |
|---|
| Chromosome: | 2 |
| QTL Peak Location: | 44.06 (cM) |
| QTL Span: | 44.06-44.06 (cM)
35.0-35.0 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs406187720 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Chromosome-wise |
| Threshold significance level: | Significant |
 |
P_values | 6.28E-5 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | NTRK2 (neurotrophic receptor tyrosine kinase 2) |
| Cis/Trans acting type: |  |
| Links:
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Baluchi ewes. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina OvineSNP50 BeadChip and GWAS was performed for litter size. A total of 45,342 SNPs were used for analysis. |
| Analysis: | The general linear model was used for GWAS. |
| Software: | GenABEL in R, AIREMLF90, BLUPF90 |
| Notes: | |
| Reference |
|---|
| Authors: | Esmaeili-Fard SM, Gholizadeh M, Hafezian SH, Abdollahi-Arpanahi R |
| Affiliation: | Department of Animal and Dairy Science, University of Georgia, Athens, GA, United States of America |
| Title: | Genome-wide association study and pathway analysis identify NTRK2 as a novel candidate gene for litter size in sheep |
| Journal: | PloS one, 2021, 16(1): e0244408 |
| Links: |
PubMed | Abstract | List all data
|
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