Release 56
(Apr 24, 2025)

QTL 13842 Description:

 Trait Information
Trait name: Coat color Vertebrate Trait Ontology: Coat/hair pigmentation trait
Reported name: Coat color Product Trait Ontology: n/a
Symbol: COATC Clinical Measurement Ontology: Coat/hair color measurement
 QTL Map Information
Chromosome:2
QTL Peak Location:103 (cM)
QTL Span:102.02-102.22 (cM)
81.0-81.1 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:BMS678
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:Microsatellites
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
LOD_score110.20
P_values<0.0001
Dominance effect:n/a
Additive effect:n/a
Associated Gene:TYRP1 (tyrosinase-related protein 1)
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #13842
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  •  QTL Experiment in Brief
    Animals:Animals were Soay sheep.
     Breeds associated:
    Design:Animals were genotyped for six polymorphisms in TYRP1 and analyzed for coat color.
    Analysis:Linkage analysis was performed.
    Software:CRIMAP
    Notes: 
    Links:Edit

     Reference
    Authors:Gratten J, Beraldi D, Lowder BV, McRae AF, Visscher PM, Pemberton JM, Slate J
    Affiliation:Department of Animal and Plant Sciences, University of Sheffield, Western Bank, Sheffield S10 2TN, UK
    Title:Compelling evidence that a single nucleotide substitution in TYRP1 is responsible for coat-colour polymorphism in a free-living population of Soay sheep
    Journal:Proc Biol Sci, 2007, 274(1610): 619-26
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:869 G>T
    User inputs on reference #17254985
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  • Cite this Data:

    Animal QTLdb: QTL13842 was published in 2007, and was curated into QTLdb on 2012-07-31. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:13842

     

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