QTL #126998 Description:

 Trait Information
Trait name: Tail fat deposition Vertebrate Trait Ontology: n/a
Reported name: Product Trait Ontology: n/a
Symbol: TAILFD Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:3
QTL Peak Location:105.73 (cM)
QTL Span:105.63-105.84 (cM)
78.2-78.4 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":rs417564684
Peak:rs411939478
Lower, "Significant":rs411738913
Lower, "Suggestive":n/a
Marker type:SIG of SEL
Analysis type:QTL
Model tested:Mendelian
Test base:-
Threshold significance level:Significant
Fst0.37
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were fat-tailed (Hu, Tong, Large-Tailed Han, and Lop) and thin-tailed (Tibetan sheep from Qinhai, Sichuan, and Tibet) sheep.
     Breeds associated:
    n/a
    Design:Animals were genotyped using the Illumina OvineSNP50 BeadChip and analyzed for signatures of selection related to tail fat deposition.
    Analysis:Selection signature analysis was conducted using hapFLK and F(ST) approaches.
    Software:PLINK, SNPSTATS R package, HAPFLK
    Notes: 
    Links:Edit
     Reference
    Authors:Yuan Z, Liu E, Liu Z, Kijas J W, Zhu C, Hu S, Ma X, Zhang L, Du L, Wang H, Wei C
    Affiliation:Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, China
    Title:Selection signature analysis reveals genes associated with tail type in Chinese indigenous sheep
    Journal:Animal genetics, 2017, 48(1): 55-66
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  

     Additional Information
    Comments:Identified by Fst
    User inputs on reference #27807880
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