| QTL Map Information |
|---|
| Chromosome: | 7 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
66.8-66.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs268247914 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | - |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 1.23E-5 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Jonica and Siriana goats. |
| Breeds associated:
n/a
|
| Design: | Animals were genotyped using the Illumina GoatSNP50 BeadChip and GWAS was performed for susceptibility to Johne's disease/M. paratuberculosis. A total of 50,773 SNPs were used for analysis. |
| Analysis: | GWAS was performed using the egscore function from the GenABEL package based on the EIGENSTRAT method. |
| Software: | GenABEL in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Minozzi G, De Iorio MG, Palazzo F, Gandini G, Biffani S, Paolillo G, Ciani E, Di Marco Lo Presti V, Stella A, Williams JL |
| Affiliation: | Department of Veterinary Medicine and Animal Sciences, Università degli Studi di Milano, Lodi, Italy |
| Title: | Genome-wide association study for antibody response to Mycobacterium avium ssp. paratubeculosis in goats |
| Journal: | Animal Genetics, 2023, 54(1): 78-81 |
| Links: |
PubMed | Abstract | List all data
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