| QTL Map Information |
|---|
| Chromosome: | 6 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
4.4-4.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs268259784 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
FDR | 4.09E-2 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Murciano-Granadina goats. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina OvineSNP50 BeadChip and GWAS were performed for milk traits. A total of 48,722 SNPs were used for analysis. |
| Analysis: | A linear mixed model was used. |
| Software: | EIGENSOFT v6.1.4, GEMMA v0.98, BEDTools v2.25.0, PLINK v1.9 |
| Notes: | |
| Reference |
|---|
| Authors: | Guan D, Landi V, Luigi-Sierra MG, Delgado JV, Such X, Castelló A, Cabrera B, Mármol-Sánchez E, Fernández-Alvarez J, de la Torre Casañas JLR, Martínez A, Jordana J, Amills M |
| Affiliation: | Centre for Research in Agricultural Genomics (CRAG), CSIC-IRTA-UAB-UB, Universitat Autònoma de Barcelona, 08193 Bellaterra, Spain |
| Title: | Analyzing the genomic and transcriptomic architecture of milk traits in Murciano-Granadina goats |
| Journal: | Journal of animal science and biotechnology, 2020, 11: 35 |
| Links: |
PubMed | Abstract | List all data
|
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