| QTL Map Information |
|---|
| Chromosome: | 6 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
35.4-35.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs268245397 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Chromosome-wise |
| Threshold significance level: | Significant |
 |
FDR | 0.042 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Murciano-Granadina goats. |
| Breeds associated:
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| Design: | Goats were genotyped using the Illumina GoatSNP50 BeadChip, and GWAS were performed for dairy production traits. A total of 48,785 SNPs were used for analysis. |
| Analysis: | A univariate linear mixed model was used with two approaches: 1) independent GWAS for each lactation, and 2) a single GWAS combining data from the three lactations (longitudinal analysis). |
| Software: | PLINK 1.9, GEMMA |
| Notes: | |
| Reference |
|---|
| Authors: | Luigi-Sierra MG, Martínez A, Macri M, Delgado JV, Castelló A, Alvarez JF, Such X, Jordana J, Amills M |
| Affiliation: | Centre for Research in Agricultural Genomics (CRAG), CSIC-IRTA-UAB-UB, Campus Universitat Autònoma de Barcelona, Bellaterra, Spain |
| Title: | Single and longitudinal genome-wide association studies for dairy traits available in goats with three recorded lactations |
| Journal: | Animal Genetics, 2024, 55(2):257-264 |
| Links: |
PubMed | Abstract | List all data
|
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