QTL #96404 Description:

 Trait Information
Trait name: Bovine tuberculosis susceptibility Vertebrate Trait Ontology: n/a
Reported name: Product Trait Ontology: n/a
Symbol: BTBS Clinical Measurement Ontology: Disease process measurement
 QTL Map Information
Chromosome:14
QTL Peak Location:n/a
QTL Span:n/a
7.1-7.1 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs29026103
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Analysis type:Association
Model tested:Mendelian
Test base:Experiment-wise
Threshold significance level:Significant
VARIANCEn/a
P_valuesn/a
Bayes_value27.19
LOD_scoren/a
LS_meann/a
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Irish dairy cattle (Holstein-Friesian).
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineHD BeadChip and analyzed for bovine tuberculosis susceptibility. A total of 597,144 autosomal SNPs were used for analysis.
    Analysis:A single-SNP regression approach and a Bayesian approach were used.
    Software:ASReml, Beagle, WOMBAT, GenSel, PLINK
    Notes: 
    Links:Edit
     Reference
    Authors:Richardson IW, Berry DP, Wiencko HL, Higgins IM, More SJ, McClure J, Lynn DJ, Bradley DG
    Affiliation:Smurfit Institute of Genetics, University of Dublin, Trinity College, Dublin 2, Ireland
    Title:A genome-wide association study for genetic susceptibility to Mycobacterium bovis infection in dairy cattle identifies a susceptibility QTL on chromosome 23
    Journal:Genetics, selection, evolution : GSE, 2016, 48: 19
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  
    User inputs on reference #26960806
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