| QTL Map Information |
|---|
| Chromosome: | 9 |
| QTL Peak Location: | 108.85 (cM) |
| QTL Span: | 108.85-108.85 (cM)
99.3-99.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs108972894 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
Bayes_value | 11.42 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Irish dairy cattle (Holstein-Friesian). |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina BovineHD BeadChip and analyzed for bovine tuberculosis susceptibility. A total of 597,144 autosomal SNPs were used for analysis. |
| Analysis: | A single-SNP regression approach and a Bayesian approach were used. |
| Software: | ASReml, Beagle, WOMBAT, GenSel, PLINK |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Richardson IW, Berry DP, Wiencko HL, Higgins IM, More SJ, McClure J, Lynn DJ, Bradley DG |
| Affiliation: | Smurfit Institute of Genetics, University of Dublin, Trinity College, Dublin 2, Ireland |
| Title: | A genome-wide association study for genetic susceptibility to Mycobacterium bovis infection in dairy cattle identifies a susceptibility QTL on chromosome 23 |
| Journal: | Genetics, Selection, Evolution : GSE, 2016, 48: 19 |
| Links: |
PubMed | Abstract | List all data
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