| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | 31.58 (cM) |
| QTL Span: | 31.47-31.70 (cM)
33.2-33.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs109099479 |
| Peak: | rs43229554 |
| Lower, "Significant": | rs43225242 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | <0.01 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were male Israeli Holstein calves. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineHD BeadChip and analyzed for lung phenotypes indicative of bovine respiratory disease. A total of 570,563 SNPs were used for analysis. |
| Analysis: | A single-marker test for marker-trait association was performed. Moving average of -logP was used to map QTLs and Log drop was used to define their boundaries (QTLRs). |
| Software: | BedTools |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Lipkin E, Strillacci MG, Eitam H, Yishay M, Schiavini F, Soller M, Bagnato A, Shabtay A |
| Affiliation: | Department of Ruminant Sciences, Agricultural Research Organization (ARO), Bet-Dagan, Israel |
| Title: | The Use of Kosher Phenotyping for Mapping QTL Affecting Susceptibility to Bovine Respiratory Disease |
| Journal: | PloS one, 2016, 11(4): e0153423 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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