QTL #65823 Description:

 Trait Information
Trait name: Sperm counts Vertebrate Trait Ontology: Sperm quantity
Reported name: Number of sperm per ejaculate Product Trait Ontology: n/a
Symbol: SEMENQ Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:1
QTL Peak Location:n/a
QTL Span:n/a
150.3-150.3 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs110080663
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Analysis type:Association
Model tested:Mendelian
Test base:Comparison-wise
Threshold significance level:Significant
VARIANCEn/a
P_values5.65E-05
LOD_scoren/a
LS_meann/a
Dominance effect:n/a
Additive effect:n/a
Associated Gene:DOPEY2 (dopey family member 2)
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were mature Holstein bulls.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineSNP50 BeadChip version 1 or 2 and analyzed for semen quality traits. A total of 41,188 SNPs were used for analysis.
    Analysis:A compressed mixed linear model was used.
    Software:SAS, DMU, GAPIT
    Notes: 
    Links:Edit
     Reference
    Authors:Qin C, Yin H, Zhang X, Sun D, Zhang Q, Liu J, Ding X, Zhang Y, Zhang S
    Affiliation:College of Animal Science and Technology, Key Laboratory of Animal Genetics and Breeding of Ministry of Agriculture, National Engineering Laboratory of Animal Breeding, China Agricultural University, Beijing 100193, China
    Title:Genome wide association study for semen production traits in Holstein bull population in China
    Journal:Animal Genetics, 2016,
    Links:  No PubMed entry  |  Abstract   |  List all QTL   |  Edit  

     Additional Information
    Comments:Per ejaculate
    User inputs on reference #ISU0080
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