QTL #64615 Description:

 Trait Information
Trait name: Somatic cell score Vertebrate Trait Ontology: Milk somatic cell quantity
Reported name: Product Trait Ontology: Milk somatic cell count
Symbol: SCS Clinical Measurement Ontology: Milk somatic cell score
 QTL Map Information
QTL Peak Location:62.35 (cM)
QTL Span:62.35-62.35 (cM)
33.8-33.8 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Chromosome-wise
Threshold significance level:Significant
Dominance effect:n/a
Additive effect:n/a
Associated Gene: ()
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:

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  •  QTL Experiment in Brief
    Animals:Animals were Chinese Holstein cows.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for somatic cell score. A total of 43,885 SNPs were used for analysis.
    Analysis:Mixed model based single locus regression analysis was performed.
    Software:RUNGE, FORTRAN, Haploview
    Authors:Wang X, Ma P, Liu J, Zhang Q, Zhang Y, Ding X, Jiang L, Wang Y, Zhang Y, Sun D, Zhang S, Su G, Yu Y
    Affiliation:Key Laboratory of Animal Genetics, Breeding and Reproduction, Ministry of Agriculture of China, National Engineering Laboratory for Animal Breeding, College of Animal Science and Technology, China Agricultural University, 100193, Bei
    Title:Genome-wide association study in Chinese Holstein cows reveal two candidate genes for somatic cell score as an indicator for mastitis susceptibility
    Journal:BMC genetics, 2015, 16: 111
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  

     Additional Information
    User inputs on reference #26370837
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