QTL #63240 Description:

 Trait Information
Trait name: Milk palmitoleic acid content Vertebrate Trait Ontology: Milk fatty acid cis-9-C16:1 amount
Reported name: Product Trait Ontology: Milk fatty acid cis-9-C16:1 content
Symbol: MFA-C16:1 Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:14
QTL Peak Location:2.35 (cM)
QTL Span:2.35-2.35 (cM)
1.8-1.8 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs109421300
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Genome-wise
Threshold significance level:Significant
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Chinese and Danish Holstein cows.
     Breeds associated:
    Design:Animals were genotyped using either the BovineSNP50 BeadChip or BovineHD BeadChip and analyzed for milk fatty acid composition. BovineSNP50 data were imputed to HD marker data. The final marker set included 486,464 SNPs.
    Analysis:Single-SNP linear regression models were used.
    Software:DMU
    Notes:This study used data that were previously analyzed (PMID 24858810 & 25511820). Only the Chinese data (here imputed from 50k to HD) and combined data (Chinese & Danish populations) that reached genome-wide significance were entered.
    Links:Edit
     Reference
    Authors:Li X, Buitenhuis A J, Lund M S, Li C, Sun D, Zhang Q, Poulsen N A, Su G
    Affiliation:Center for Quantitative Genetics and Genomics, Department of Molecular Biology and Genetics, Aarhus University, 8830 Tjele, Denmark
    Title:Joint genome-wide association study for milk fatty acid traits in Chinese and Danish Holstein populations
    Journal:Journal of dairy science, 2015, 98(11): 8152-63
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  

     Additional Information
    Comments:Joint analysis of Chinese and Danish data
    User inputs on reference #26364108
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