QTL #62086 Description:

 Trait Information
Trait name: Sperm counts Vertebrate Trait Ontology: Sperm quantity
Reported name: total number of sperm Product Trait Ontology: n/a
Symbol: SEMENQ Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:22
QTL Peak Location:75.38 (cM)
QTL Span:75.38-75.38 (cM)
48.1-48.1 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs41625599
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Analysis type:Association
Model tested:Mendelian
Test base:Experiment-wise
Threshold significance level:Significant
VARIANCEn/a
P_values0.0094
LOD_scoren/a
LS_meann/a
Dominance effect:n/a
Additive effect:n/a
Associated Gene: ()
Links:   NCBI GeneDB  |  Edit  |   Map view
User inputs on QTL #62086
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were Holstein-Friesian bulls.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for semen volume and sperm count. A total of 35,093 SNPs were used for analysis.
    Analysis:An additive model of the linear regression analysis was used.
    Software:GoldenHelix SVS7
    Notes: 
    Links:Edit
     Reference
    Authors:Hering DM, Oleński K, Ruść A, Kaminski S
    Affiliation:University of Warmia and Mazury in Olsztyn, Department of Animal Genetics, 10-719 Olsztyn, Poland
    Title:Genome-wide association study for semen volume and total number of sperm in Holstein-Friesian bulls
    Journal:Animal reproduction science, 2014, 151(3-4): 126-30
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  
    User inputs on reference #25465359
  • Add your comments
  • Note similar findings
  • Note contradictions

  • Web Access Statistics © 2003-2019 NAGRP - Bioinformatics Coordination Program.
    Contact: NAGRP Bioinformatics Team
    Helpdesk