Release 56
(Apr 24, 2025)

QTL 6040 Description:

 Trait Information
Trait name: Subcutaneous fat thickness Vertebrate Trait Ontology: Subcutaneous adipose thickness
Reported name: Subcutaneous fat Product Trait Ontology: n/a
Symbol: SUBFAT Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:14
QTL Peak Location:46.3 (cM)
QTL Span:21.45-21.65 (cM)
17.0-17.2 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
LS_mean0.333
P_values0.002
Dominance effect:n/a
Additive effect:n/a
Associated Gene:CRH (corticotropin releasing hormone)
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were a Wagyu x Limousin cross.
     Breeds associated:
    Design:Animals were genotyped for 4 SNPs in the CRH gene and analyzed for subcutaneous fat and marbling score.
    Analysis:Association analysis included pairwise comparisons of least squares means, as well as a quantitative transmission disequilibrium test.
    Software:SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Wibowo, Tito A; Michal, Jennifer J; Jiang, Zhihua
    Affiliation:Department of Animal Sciences, Washington State University, Pullman, WA 99164-6351
    Title:Corticotropin releasing hormone is a promising candidate gene for marbling and subcutaneous fat depth in beef cattle.
    Journal:Genome (National Research Council Canada), 2007, 50 (10): 939-45
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #18059556
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  • Cite this Data:

    Animal QTLdb: QTL6040 was published in 2007, and was curated into QTLdb on 2009-07-21. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:6040

     

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