QTL #56976 Description:

 Trait Information
Trait name: Intramuscular fat Vertebrate Trait Ontology: Intramuscular adipose amount
Reported name: Product Trait Ontology: Intramuscular fat content
Symbol: EEF Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:27
QTL Peak Location:21.8 (cM)
QTL Span:22.98-23.18 (cM)
13.3-13.4 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Analysis type:Association
Model tested:Mendelian
Test base:-
Threshold significance level:Significant
LOD_scoren/a
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:MTNR1A (melatonin receptor 1A)
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Qinchuan cattle.
     Breeds associated:
    Design:Animals were genotyped for four SNPs in MTNR1A and analyzed for growth and meat quality traits.
    Analysis:The general linear model procedure was used. All analyses were performed first using a full animal model, then a reduced animal model.
    Software:SAS, SHEsis
    Notes: 
    Links:Edit
     Reference
    Authors:Yang W, Wang Y, Fu C, Zan LS
    Affiliation:College of Animal Science and Technology, Northwest A&F University, Shaanxi 712100, China
    Title:Association study and expression analysis of MTNR1A as a candidate gene for body measurement and meat quality traits in Qinchuan cattle
    Journal:Gene, 2015, 570(23):199-204
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  

     Additional Information
    Comments:g.A455G/g.G489A/g.C635T
    User inputs on reference #26067916
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