| QTL Map Information |
|---|
| Chromosome: | 25 |
| QTL Peak Location: | 42.06 (cM) |
| QTL Span: | 42.06-42.06 (cM)
26.1-26.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs42071217 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | -0.45 |
| Associated Gene: | APOBR (apolipoprotein B receptor) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein-Friesian cows. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for milk levels of metabolites used as ketosis biomarkers. A total of 41,409 SNPs were used for analysis. |
| Analysis: | A linear mixed model was used. |
| Software: | R software |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Tetens J, Heuer C, Heyer I, Klein MS, Gronwald W, Junge W, Oefner PJ, Thaller G, Krattenmacher N |
| Affiliation: | Institute of Animal Breeding and Husbandry, Christian Albrecht University, Kiel, Germany |
| Title: | Polymorphisms within the APOBR gene are highly associated with milk levels of prognostic ketosis biomarkers in dairy cows |
| Journal: | Physiological genomics, 2015, 47(4): 129-37 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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