QTL #56317 Description:

 Trait Information
Trait name: Milk palmitic acid content Vertebrate Trait Ontology: Milk fatty acid C16:0 amount
Reported name: Product Trait Ontology: Milk fatty acid C16:0 content
Symbol: MFA-C16:0 Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:3
QTL Peak Location:119.05 (cM)
QTL Span:123.22-126.56 (cM)
118.2-121.4 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":rs41586388
Peak:
Lower, "Significant":rs41612141
Lower, "Suggestive":n/a
Analysis type:QTL
Model tested:Mendelian
Test base:Genome-wise
Threshold significance level:Significant
VARIANCE2.9
P_values<0.05
LOD_scoren/a
LS_meann/a
Dominance effect:n/a
Additive effect:n/a
Associated Gene: ()
Links:   NCBI GeneDB  |  Edit  |   Map view
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  •  QTL Experiment in Brief
    Animals:Animals were first-lactation Dutch Holstein-Friesian cows.
     Breeds associated:
    Design:Animals were genotyped using a custom Illumina Infinium array and analyzed for milk fatty acid content. A total of 44,733 SNPs were used for analysis.
    Analysis:A two-step single SNP association analysis was performed using a general linear model and an animal model.
    Software:SNPassoc in R, ASReml
    Notes: 
    Links:Edit
     Reference
    Authors:Bouwman AC, Bovenhuis H, Visker MH, van Arendonk JA
    Affiliation:Animal Breeding and Genomics Centre, Wageningen University, P.O. Box 338, 6700 AH Wageningen, the Netherlands
    Title:Genome-wide association of milk fatty acids in Dutch dairy cattle
    Journal:BMC Genomics, 2011, 12: 43
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  
    User inputs on reference #21569316
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