QTL #43058 Description:

 Trait Information
Trait name: Foot angle Vertebrate Trait Ontology: Hoof angle
Reported name: Product Trait Ontology: n/a
Symbol: FANG Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:7
QTL Peak Location:67.46 (cM)
QTL Span:67.46-67.46 (cM)
55.8-55.8 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs109565627
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Analysis type:Association
Model tested:Mendelian
Test base:Genome-wise
Threshold significance level:Significant
VARIANCEn/a
P_values<0.05
LOD_scoren/a
LS_meann/a
Dominance effect:n/a
Additive effect:n/a
Associated Gene: ()
Links:   Edit  |   Map view
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  •  QTL Experiment in Brief
    Animals:Animals were Holstein cows.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for 31 production, health, reproduction, and conformation traits. A total of 45,878 SNPs were used for analysis.
    Analysis:Least-squares regression was used.
    Software:epiSNP, R software, SAS
    Notes: 
    Links:Edit
     Reference
    Authors:Cole JB, Wiggans GR, Ma L, Sonstegard TS, Lawlor TJ Jr, Crooker BA, Van Tassell CP, Yang J, Wang S, Matukumalli LK, Da Y
    Affiliation:Department of Animal Science, University of Minnesota, St. Paul, Minnesota, USA
    Title:Genome-wide association analysis of thirty one production, health, reproduction and body conformation traits in contemporary U.S. Holstein cows
    Journal:BMC Genomics, 2011, 12:408
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  

     Additional Information
    Comments:Predicted transmitting ability
    User inputs on reference #21831322
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