QTL #37380 Description:

 Trait Information
Trait name: Facial pigmentation Vertebrate Trait Ontology: n/a
Reported name: Product Trait Ontology: n/a
Symbol: FPIGMT Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:6
QTL Peak Location:82.49 (cM)
QTL Span:82.49-82.49 (cM)
72.4-72.4 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs43477886
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Analysis type:Association
Model tested:Mendelian
Test base:Comparison-wise
Threshold significance level:Significant
VARIANCEn/a
P_values3.68E-14
LOD_scoren/a
LS_meann/a
Dominance effect:n/a
Additive effect:n/a
Associated Gene: ()
Links:   NCBI GeneDB  |  Edit  |   Map view
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  •  QTL Experiment in Brief
    Animals:Animals were Fleckvieh cattle.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for coat color saturation. A total of 35,272 SNPs were used for analysis.
    Analysis:Single-marker regression was used.
    Software:R software
    Notes: 
    Links:Edit
     Reference
    Authors:Mészáros G1, Petautschnig E, Schwarzenbacher H, Sölkner J
    Affiliation:Division of Livestock Sciences, University of Natural Resources and Life Sciences, A-1180, Vienna, Austria
    Title:Genomic regions influencing coat color saturation and facial markings in Fleckvieh cattle
    Journal:Animal genetics, 2015, 46(1): 65-8
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  

     Additional Information
    Comments:Pigmented spot on cheek
    User inputs on reference #25515556
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