QTL #36568 Description:

 Trait Information
Trait name: Milk caproic acid content Vertebrate Trait Ontology: Milk fatty acid C6:0 amount
Reported name: Milk caproic acid percentage Product Trait Ontology: Milk fatty acid C6:0 content
Symbol: MFA-C6:0 Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:17
QTL Peak Location:40.86 (cM)
QTL Span:39.40-43.32 (cM)
29.9-32.9 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":rs109426433
Peak:
Lower, "Significant":rs135934524
Lower, "Suggestive":n/a
Analysis type:QTL
Model tested:Mendelian
Test base:-
Threshold significance level:Significant
VARIANCE2.7
P_values<0.05
LOD_scoren/a
LS_meann/a
Dominance effect:n/a
Additive effect:n/a
Associated Gene: ()
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Holstein-Friesian cows.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineSNP50 BeadChip, with data imputed to the 777k SNP chip. A total of 22,240 SNPs on BTA17 were used for analysis of association with milk fatty acid composition.
    Analysis:An animal model was used.
    Software:ASReml, PLINK
    Notes: 
    Links:Edit
     Reference
    Authors:Duchemin S I, Visker M H P W, Van Arendonk J A M, Bovenhuis H
    Affiliation:Animal Breeding and Genomics Centre, Wageningen University, PO Box 338, 6700 AH Wageningen, the Netherlands
    Title:A quantitative trait locus on Bos taurus autosome 17 explains a large proportion of the genetic variation in de novo synthesized milk fatty acids
    Journal:Journal of dairy science, 2014, 97(11): 7276-85
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  
    User inputs on reference #25242430
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