QTL #36478 Description:

 Trait Information
Trait name: Shear force Vertebrate Trait Ontology: n/a
Reported name: Product Trait Ontology: Meat tenderness
Symbol: SF Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:29
QTL Peak Location:71.88 (cM)
QTL Span:71.88-71.88 (cM)
50.5-50.5 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs109102750
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Analysis type:Association
Model tested:Mendelian
Test base:Comparison-wise
Threshold significance level:Significant
LikelihoodR18.8
VARIANCEn/a
P_values7.3E-6
LOD_scoren/a
LS_meann/a
Dominance effect:n/a
Additive effect:n/a
Associated Gene: ()
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #36478
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were Charolais, Limousin, and Blonde d'Aquitaine cattle.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineSNP50 BeadChip, v1 or v2. The numbers of SNPs used for analysis were 37,556 (Blonde d'Aquitaine), 37,581 (Charolais), and 36,919 (Limousin).
    Analysis:Mixed models were used.
    Software:PHASEBOOK
    Notes:dbSNP IDs could not be found for several SNPs; these data were not entered.
    Links:Edit
     Reference
    Authors:Allais S, Levéziel H, Hocquette J F, Rousset S, Denoyelle C, Journaux L, Renand G
    Affiliation:INRA, Clermont Université, UMR1019 Unité de Nutrition Humaine, Centre de Recherches en Nutrition Humaine d'Auvergne, F-63001 Clermont-Ferrand, France
    Title:Fine mapping of quantitative trait loci underlying sensory meat quality traits in three French beef cattle breeds
    Journal:Journal of animal science, 2014, 92(10): 4329-41
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  
    User inputs on reference #25149327
  • Add your comments
  • Note similar findings
  • Note contradictions

  • Web Access Statistics © 2003-2020 NAGRP - Bioinformatics Coordination Program.
    Contact: NAGRP Bioinformatics Team
    Helpdesk