QTL #34629 Description:

 Trait Information
Trait name: Milk palmitic acid content Vertebrate Trait Ontology: Milk fatty acid C16:0 amount
Reported name: Milk palmitic acid percentage Product Trait Ontology: Milk fatty acid C16:0 content
Symbol: MFA-C16:0 Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:27
QTL Peak Location:8.21 (cM)
QTL Span:8.21-8.21 (cM)
4.5-4.5 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs134986150
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Analysis type:Association
Model tested:Mendelian
Test base:Experiment-wise
Threshold significance level:Significant
VARIANCEn/a
P_values0.049936451
LOD_scoren/a
LS_meann/a
Dominance effect:n/a
Additive effect:n/a
Associated Gene:ANGPT2 (angiopoietin 2)
Links:   NCBI GeneDB  |  Edit  |   Map view
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  •  QTL Experiment in Brief
    Animals:Animals were Danish Holstein and Danish Jersey dairy cattle.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineHD BeadChip and analyzed for milk fat traits. A total of 494,984 SNPs were used in both breeds.
    Analysis:Linear models were used.
    Software:DMU
    Notes: 
    Links:Edit
     Reference
    Authors:Buitenhuis B, Janss LL, Poulsen NA, Larsen LB, Larsen MK, S°rensen P
    Affiliation:Department of Molecular Biology and Genetics, Aarhus University, Center for Quantitative Genetics and Genomics, Blichers AllÚ 20, P,O, Box 50, DK-8830 Tjele, Denmark
    Title:Genome-wide association and biological pathway analysis for milk-fat composition in Danish Holstein and Danish Jersey cattle
    Journal:BMC genomics, 2014, 15(1): 1112
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  
    User inputs on reference #25511820
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