QTL #32490 Description:

 Trait Information
Trait name: Somatic cell score Vertebrate Trait Ontology: Milk somatic cell quantity
Reported name: Product Trait Ontology: Milk somatic cell count
Symbol: SCS Clinical Measurement Ontology: Milk somatic cell score
 QTL Map Information
Chromosome:27
QTL Peak Location:5.93 (cM)
QTL Span:5.93-5.93 (cM)
3.2-3.2 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs110001968
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Genome-wise
Threshold significance level:Significant
LOD_scoren/a
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Valdostana Red Pied cattle.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineHD BeadChip and analyzed for somatic cell score. A total of 655,665 SNPs were used for analysis.
    Analysis:A multiple-marker test was used.
    Software:R software
    Notes: 
    Links:Edit
     Reference
    Authors:Strillacci MG, Frigo E, Schiavini F, Samoré AB, Canavesi F, Vevey M, Cozzi MC, Soller M, Lipkin E, Bagnato A
    Affiliation:Department of Health, Animal Science and Food Safety (VESPA), University of Milan, Via Celoria 10, Milan, 20133, Italy
    Title:Genome-wide association study for somatic cell score in Valdostana Red Pied cattle breed using pooled DNA
    Journal:BMC genetics, 2014, 15: 106
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  
    User inputs on reference #25288516
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