QTL #31775 Description:

 Trait Information
Trait name: Eicosapentaenoic acid content Vertebrate Trait Ontology: n/a
Reported name: Product Trait Ontology: Meat fatty acid C20:5(n-3) content
Symbol: FA-C20:5 Clinical Measurement Ontology: n/a
 QTL Map Information
QTL Peak Location:55.35 (cM)
QTL Span:55.57-56.68 (cM)
49.0-50.0 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":rs137823965
Lower, "Significant":rs42507195
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:QTL
Model tested:Mendelian
Test base:-
Threshold significance level:Significant
Dominance effect:n/a
Additive effect:n/a
Associated Gene:RORA (RAR-related orphan receptor A)
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:

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  •  QTL Experiment in Brief
    Animals:Animals were Nellore cattle.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineHD 770k BeadChip and analyzed for IMF and muscle fatty acid composition. A total of 449,363 SNPs were used for analysis.
    Analysis:Association analysis was performed using Bayes B.
    Software:GenSel, SAS, ASReml
    Authors:Cesar AS, Regitano LC, Mourão GB, Tullio RR, Lanna DP, Nassu RT, Mudado MA, Oliveira PS, do Nascimento ML, Chaves AS, Alencar MM, Sonstegard TS, Garrick DJ, Reecy JM, Coutinho LL
    Affiliation:Department of Animal Science, University of São Paulo, Piracicaba SP 13418-900, Brazil
    Title:Genome-wide association study for intramuscular fat deposition and composition in Nellore cattle
    Journal:BMC genetics, 2014, 15: 39
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  
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