| QTL Map Information |
|---|
| Chromosome: | 12 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
4.1-4.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs42274954 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | - |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were crossbred dairy cattle in Ethiopia. |
| Breeds associated:
n/a
|
| Design: | Animals were genotyped using either the Illumina BovineSNP50 v2 BeadChip or the Illumina SNP100K array. Genotype imputation was performed and GWAS were carried out for milk composition traits. A total of 85,127 SNPs were used for analysis. |
| Analysis: | The fixed and random model circulating probability unification (FarmCPU) model was used. |
| Software: | Beagle v5.3, PLINK v1.9, rMVP R package v1.0.7 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Rekik B, Mestawet T, Girma A, Seid M, Besufekad J, Meseret S |
| Affiliation: | Department of Animal Science, College of Agriculture and Natural Resource Sciences, Debre Berhan University, PO Box 445, Debre Berhan, Ethiopia |
| Title: | Genome-Wide Association Study for Test-Day Milk Yield, Proteins, and Composition Traits of Crossbred Dairy Cattle in Ethiopia |
| Journal: | International journal of genomics, 2024, 2024: 1472779 |
| Links: |
PubMed | Abstract | List all data
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