QTL #31162 Description:

 Trait Information
Trait name: Sperm counts Vertebrate Trait Ontology: Sperm quantity
Reported name: sperm counts Product Trait Ontology: n/a
Symbol: SEMENQ Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:25
QTL Peak Location:15.1 (cM)
QTL Span:25.51-25.71 (cM)
16.2-16.4 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Analysis type:Association
Model tested:Mendelian
Test base:-
Threshold significance level:Significant
VARIANCEn/a
P_values<0.05
LOD_scoren/a
LS_meann/a
Dominance effect:n/a
Additive effect:n/a
Associated Gene:TNP2 (transition protein 2 (during histone to protamine replacement))
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Chinese Holstein bulls.
     Breeds associated:
    Design:Animals were genotyped for three SNPs in TNP2 and analyzed for semen quality traits.
    Analysis:A least-squares procedure was used.
    Software:SHEsis, SAS
    Notes: 
    Links:Edit
     Reference
    Authors:Gao Q, Ju Z, Zhang Y, Huang J, Zhang X, Qi C, Li J, Zhong J, Li G, Wang C
    Affiliation:Dairy Cattle Research Center, Shandong Academy of Agricultural Science, Jinan, PR China
    Title:Association of TNP2 gene polymorphisms of the bta-miR-154 target site with the semen quality traits of Chinese Holstein bulls
    Journal:PloS one, 2014, 9(1): e84355
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  
    User inputs on reference #24416221
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