| QTL Map Information |
|---|
| Chromosome: | 7 |
| QTL Peak Location: | 117 (cM) |
| QTL Span: | 134.87-134.87 (cM)
110.2-110.2 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
F_Stat | 3.55 | | P_values | 0.011 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | CAST (calpastatin) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Spanish cattle from two beef breeds, Parda de Montaña and Pirenaica. |
| Breeds associated:
n/a
|
| Design: | Animals were genotyped for a total of eight SNPs in CAPN1 and CAST and analyzed for meat tenderness. |
| Analysis: | A linear mixed model was used. |
| Software: | SAS, PLINK |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Calvo J H, Iguácel L P, Kirinus J K, Serrano M, Ripoll G, Casasús I, Joy M, Pérez-Velasco L, Sarto P, Albertí P, Blanco M |
| Affiliation: | Unidad de Tecnología en Producción Animal, CITA, 59059 Zaragoza, Spain; ARAID, 50004 Zaragoza, Spain |
| Title: | A new single nucleotide polymorphism in the calpastatin (CAST) gene associated with beef tenderness |
| Journal: | Meat science, 2014, 96(2 Pt A): 775-82 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | CAST_4 (g.98545188A>T) |
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