QTL #30643 Description:

 Trait Information
Trait name: Scrotal circumference Vertebrate Trait Ontology: Scrotum circumference
Reported name: Product Trait Ontology: n/a
Symbol: SCRCIR Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:14
QTL Peak Location:31.92 (cM)
QTL Span:31.92-31.92 (cM)
24.4-24.4 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs42649775
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Analysis type:Association
Model tested:Mendelian
Test base:Experiment-wise
Threshold significance level:Significant
VARIANCEn/a
P_values<0.05
LOD_scoren/a
LS_meann/a
Dominance effect:n/a
Additive effect:n/a
Associated Gene:XKR4 (XK, Kell blood group complex subunit-related family, member 4)
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Brahman bulls.
     Breeds associated:
    Design:Animals were genotyped using either the BovineSNP50 v2 or the high-density SNP chip and analyzed for fertility traits. Following quality control and imputation, 729254 SNP were used for analysis.
    Analysis:A mixed model was used.
    Software:Qxpak
    Notes: 
    Links:Edit
     Reference
    Authors:Fortes MRS, Reverter A, Hawken RJ, Bolormaa S, Lehnert SA
    Affiliation:Cooperative Research Centre for Beef Genetic Technologies, University of New England, Armidale, New South Wales, Australia
    Title:Candidate genes associated with testicular development, sperm quality, and hormone levels of inhibin, luteinizing hormone, and insulin-like growth factor 1 in Brahman bulls
    Journal:Biology of reproduction, 2012, 87(3): 58
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  
    User inputs on reference #22811567
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