| QTL Map Information |
|---|
| Chromosome: | 13 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
|
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs110274438 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | - |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 2.04E-5 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Korean Hanwoo cows. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip, and GWAS were performed for reproductive traits. A total of 40,807 SNPs were used for analysis. |
| Analysis: | A linear mixed model was used. |
| Software: | PLINK v1.9, TASSEL v5.2.92, GEMMA v0.98.5, ggplot2 in R, LDBlockShop, Beagle v5.4 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Haque MA, Lee YM, Ha JJ, Jin S, Park B, Kim NY, Won JI, Kim JJ |
| Affiliation: | Department of Biotechnology, Yeungnam University, Gyeongsan, Gyeongbuk, 38541, Korea |
| Title: | Genome-wide association study identifies genomic regions associated with key reproductive traits in Korean Hanwoo cows |
| Journal: | BMC Genomics, 2024, 25(1): 496 |
| Links: |
PubMed | Abstract | List all data
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