QTL #25741 Description:

 Trait Information
Trait name: Milk yield Vertebrate Trait Ontology: Milk amount
Reported name: Milk yield (daughter deviation) Product Trait Ontology: n/a
Symbol: MY Clinical Measurement Ontology: Milk yield
 QTL Map Information
Chromosome:27
QTL Peak Location:71.71 (cM)
QTL Span:71.71-71.71 (cM)
38.9-38.9 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs41257411
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Experiment-wise
Threshold significance level:Significant
LOD_scoren/a
P_values3.07E-02
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #25741
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were Holstein-Friesian cattle.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for milk production traits. A total of 40668 SNPs were used for analyses.
    Analysis:A single-SNP regression model and a Bayesian method were used.
    Software:R, ASReml
    Notes: 
    Links:Edit
     Reference
    Authors:Meredith BK, Kearney FJ, Finlay EK, Bradley DG, Fahey AG, Berry DP, Lynn DJ
    Affiliation:Animal and Bioscience Research Department, Teagasc, Animal & Grassland Research and Innovation Centre, Grange, Dunsany, Co, Meath, Ireland
    Title:Genome-wide associations for milk production and somatic cell score in Holstein-Friesian cattle in Ireland
    Journal:BMC genetics, 2012, 13: 21
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  

     Additional Information
    Comments:Single-SNP regression analysis; DYD
    User inputs on reference #22449276
  • Add your comments
  • Note similar findings
  • Note contradictions

  • Web Access Statistics © 2003-2020 NAGRP - Bioinformatics Coordination Program.
    Contact: NAGRP Bioinformatics Team
    Helpdesk