| QTL Map Information |
|---|
| Chromosome: | 9 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
58.9-58.9 (Mbp) |
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs109056319 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 3.08E-5 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Chinese Holstein cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using the GeneSeek GGP_HDv3 chip, and GWAS was performed for immunoglobulin concentrations in serum and colostrum. A total of 91,620 SNPs were used for analysis. |
| Analysis: | Single-SNP association analysis was performed using a mixed linear model. |
| Software: | PLINK 1.90, GCTA 1.90.2, qqman in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Lin S, Ke C, Liu L, Gao Y, Xu L, Han B, Zhao Y, Zhang S, Sun D |
| Affiliation: | Department of Animal Genetics and Breeding, College of Animal Science and Technology, Key Laboratory of Animal Genetics, Breeding and Reproduction of Ministry of Agriculture & Rural Affairs, China Agricultural University, Beijing, China |
| Title: | Genome-wide association studies for immunoglobulin concentrations in colostrum and serum in Chinese Holstein |
| Journal: | BMC Genomics, 2022, 23(1): 41 |
| Links: |
PubMed | Abstract | List all data
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