QTL #25327 Description:

 Trait Information
Trait name: Milk caproic acid content Vertebrate Trait Ontology: Milk fatty acid C6:0 amount
Reported name: Milk caproic acid percentage Product Trait Ontology: Milk fatty acid C6:0 content
Symbol: MFA-C6:0 Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:7
QTL Peak Location:31.67 (cM)
QTL Span:31.74-31.84 (cM)
26.2-26.3 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":rs133787612
Peak:
Lower, "Significant":rs109305471
Lower, "Suggestive":n/a
Analysis type:QTL
Model tested:Mendelian
Test base:Comparison-wise
Threshold significance level:Significant
VARIANCEn/a
P_values0.037
LOD_scoren/a
LS_meann/a
Dominance effect:n/a
Additive effect:n/a
Associated Gene:SLC27A6 (solute carrier family 27 (fatty acid transporter), member 6)
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #25327
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were dairy cattle.
     Breeds associated:
    Design:Animals were genotyped for SNPs in SLC27A6, FABP3, and FABP4 and analyzed for milk fatty acid composition.
    Analysis:A linear mixed model was used.
    Software:ASReml, R
    Notes: 
    Links:Edit
     Reference
    Authors:Nafikov R A, Schoonmaker J P, Korn K T, Noack K, Garrick D J, Koehler K J, Minick-Bormann J, Reecy J M, Spurlock D E, Beitz D C,
    Affiliation:Department of Animal Science, Iowa State University, Ames, Iowa 50011, USA
    Title:Association of polymorphisms in solute carrier family 27, isoform A6 (SLC27A6) and fatty acid-binding protein-3 and fatty acid-binding protein-4 (FABP3 and FABP4) with fatty acid composition of bovine milk
    Journal:Journal of dairy science, 2013, 96(9): 6007-21
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  

     Additional Information
    Comments:Months 1-10
    User inputs on reference #23831098
  • Add your comments
  • Note similar findings
  • Note contradictions

  • Web Access Statistics © 2003-2019 NAGRP - Bioinformatics Coordination Program.
    Contact: NAGRP Bioinformatics Team
    Helpdesk