Release 56
(Apr 24, 2025)

QTL 22875 Description:

 Trait Information
Trait name: Intramuscular fat Vertebrate Trait Ontology: Intramuscular adipose amount
Reported name: Intramuscular fat Product Trait Ontology: Intramuscular fat content
Symbol: IMF Clinical Measurement Ontology: Intramuscular fat morphological measurement
 QTL Map Information
Chromosome:27
QTL Peak Location:57.06 (cM)
QTL Span:60.63-61.30 (cM)
33.2-33.5 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":rs110892435
Peak:
Lower, "Significant":rs41647381
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:QTL
Model tested:Mendelian
Test base:Comparison-wise
Threshold significance level:Significant
VARIANCE0.0025
P_values0.001
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Brangus heifers (3/8 Brahman x 5/8 Angus).
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for growth and carcass traits.
    Analysis:The Bayes-C method was used for whole-genome association analysis.
    Software:MTDFREML, SAS, R
    Notes: 
    Links:Edit

     Reference
    Authors:Peters S O, Kizilkaya K, Garrick D J, Fernando R L, Reecy J M, Weaber R L, Silver G A, Thomas M G
    Affiliation:Department of Animal and Range Sciences, New Mexico State University, Las Cruces 88003, USA.
    Title:Bayesian genome-wide association analysis of growth and yearling ultrasound measures of carcass traits in Brangus heifers.
    Journal:Journal of animal science, 2012, 90 (10): 3398-409
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #23038745
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  • Cite this Data:

    Animal QTLdb: QTL22875 was published in 2012, and was curated into QTLdb on 2013-12-02. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:22875

     

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