QTL #20833 Description:

 Trait Information
Trait name: Shear force Vertebrate Trait Ontology: n/a
Reported name: Product Trait Ontology: Meat tenderness
Symbol: SF Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:29
QTL Peak Location:56.05 (cM)
QTL Span:49.31-62.79 (cM)
34.6-44.1 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs42192103
Lower, "Significant":rs17872050
Lower, "Suggestive":n/a
Analysis type:QTL
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
VARIANCEn/a
P_values<0.05
LOD_scoren/a
LS_meann/a
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Angus, Hereford, Simmental, Charolais, and Limousin cattle.
     Breeds associated:
    Design:Animals were genotyped for 54790 SNPs using the BovineSNP50 BeadArray, in addition to 96 SNPs within 186 kb of CAST and CAPN1, and analyzed for meat tenderness (shear force). After filtering, the data set contained 40645 SNPs.
    Analysis:A single-trait mixed linear animal model was used.
    Software: 
    Notes: 
    Links:Edit
     Reference
    Authors:McClure M C, Ramey H R, Rolf M M, McKay S D, Decker J E, Chapple R H, Kim J W, Taxis T M, Weaber R L, Schnabel R D, Taylor J F,
    Affiliation:Division of Animal Sciences, University of Missouri, Columbia, MO 65211, USA.
    Title:Genome-wide association analysis for quantitative trait loci influencing Warner-Bratzler shear force in five taurine cattle breeds.
    Journal:Animal genetics, 2012, 43 (6): 662-73
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  
    User inputs on reference #22497286
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