QTL #20257 Description:

 Trait Information
Trait name: Tick resistance Vertebrate Trait Ontology: Response to parasitic infection trait
Reported name: Product Trait Ontology: n/a
Symbol: TICKR Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:14
QTL Peak Location:99.59 (cM)
QTL Span:99.59-99.59 (cM)
76.2-76.2 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs136857590
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
LOD_scoren/a
P_values0.0016
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #20257
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were from six breed types: Australian Red, Brown Swiss and crosses, Channel Isle breeds and crosses, Holstein-Friesian and crosses, composite taurine, and composite taurine with zebu ancestry.
     Breeds associated:
    n/a
    Design:Animals were genotyped for four SNPs in the region spanning RIPK2 on BTA14 and analyzed for tick burden.
    Analysis:Animal models were used.
    Software:ASReml
    Notes: 
    Links:Edit
     Reference
    Authors:Porto Neto LR, Jonsson NN, Ingham A, Bunch RJ, Harrison BE, Barendse W
    Affiliation:CSIRO Livestock Industries, Queensland Bioscience Precinct, ST Lucia, QLD, Australia.
    Title:The RIPK2 gene: a positional candidate for tick burden supported by genetic associations in cattle and immunological response of knockout mouse.
    Journal:Immunogenetics., 2012, 64 (5): 379-88
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  

     Additional Information
    Comments:Dairy animals
    User inputs on reference #22314416
  • Add your comments
  • Note similar findings
  • Note contradictions

  • Web Access Statistics © 2003-2020 NAGRP - Bioinformatics Coordination Program.
    Contact: NAGRP Bioinformatics Team
    Helpdesk