| QTL Map Information |
|---|
| Chromosome: | 18 |
| QTL Peak Location: | 18.26 (cM) |
| QTL Span: | 18.26-18.26 (cM)
13.8-13.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs110754697 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | 1.6E-6 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were first-lactation Holstein cows. |
| Breeds associated:
|
| Design: | Animals were gentoyped for 54,001 SNPs using the BovineSNP50 BeadChip and analyzed for somatic cell score. A total of 37,590 SNPs were used for the analysis. |
| Analysis: | Animal models were used. |
| Software: | ASReml |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Wijga S, Bastiaansen J W M, Wall E, Strandberg E, de Haas Y, Giblin L, Bovenhuis H |
| Affiliation: | Animal Breeding and Genomics Centre, Wageningen University, PO Box 338, 6700 PG, Wageningen, The Netherlands. |
| Title: | Genomic associations with somatic cell score in first-lactation Holstein cows. |
| Journal: | Journal of dairy science, 2012, 95 (2): 899-908 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Standard deviation for test-day SCS |
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