QTL #20025 Description:

 Trait Information
Trait name: Milk polyunsaturated fatty acid content Vertebrate Trait Ontology: Milk polyunsaturated fatty acid amount
Reported name: Product Trait Ontology: Milk polyunsaturated fatty acid content
Symbol: MPUFA Clinical Measurement Ontology: Milk polyunsaturated fatty acid measurement
 QTL Map Information
Chromosome:6
QTL Peak Location:113.09 (cM)
QTL Span:113.09-113.09 (cM)
99.2-99.2 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs43687643
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
VARIANCEn/a
P_values2.61E-3
LOD_scoren/a
LS_meann/a
Dominance effect:n/a
Additive effect:n/a
Associated Gene:SCD5 (stearoyl-CoA desaturase 5)
Links:   NCBI GeneDB  |  Edit  |   Map view
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  •  QTL Experiment in Brief
    Animals:Animals were Holstein cattle.
     Breeds associated:
    Design:Animals were genotyped for SNPs in SREBP1, SCAP, INSIG1, INSIG2, MBTPS2, SCD1, and SCD5 and analyzed for milk composition.
    Analysis:A linear regression model was used.
    Software:SNP Variation Suite
    Notes: 
    Links:Edit
     Reference
    Authors:Rincon G, Islas-Trejo A, Castillo AR, Bauman DE, German BJ, Medrano JF
    Affiliation:Department of Animal Science, University of California, Davis, CA 95616, USA.
    Title:Polymorphisms in genes in the SREBP1 signalling pathway and SCD are associated with milk fatty acid composition in Holstein cattle.
    Journal:The Journal of dairy research, 2012, 79 (1): 66-75
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  

     Additional Information
    Comments:DGAT1 corrected
    User inputs on reference #22114848
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