| QTL Map Information |
|---|
| Chromosome: | 22 |
| QTL Peak Location: | 49.01 (cM) |
| QTL Span: | 48.99-49.04 (cM)
32.7-32.7 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs110358497 |
| Peak: | rs110358497 |
| Lower, "Significant": | rs133014808 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
VARIANCE | 2.68% | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | TAFA4 (TAFA chemokine like family member 4) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
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| Animals: | Animals were Chinese Simmental beef cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina BovineHD BeadChip and analyzed for growth traits. A total of 596,297 SNPs were used for analysis. |
| Analysis: | Weighted single-step GWAS was performed using a single-trait animal model. |
| Software: | PLINK, BLUPF90 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Zhuang Z, Xu L, Yang J, Gao H, Zhang L, Gao X, Li J, Zhu B |
| Affiliation: | Laboratory of Molecular Biology and Bovine Breeding, Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, China |
| Title: | Weighted Single-Step Genome-Wide Association Study for Growth Traits in Chinese Simmental Beef Cattle |
| Journal: | Genes, 2020, 11(2): E189 |
| Links: |
PubMed | Abstract | List all data
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