QTL #19016 Description:

 Trait Information
Trait name: Clinical mastitis Vertebrate Trait Ontology: n/a
Reported name: Clinical mastitis (DYD) Product Trait Ontology: n/a
Symbol: CM Clinical Measurement Ontology: Disease incidence/prevalence measurement
 QTL Map Information
Chromosome:10
QTL Peak Location:103.16 (cM)
QTL Span:103.16-103.16 (cM)
91.0-91.0 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs41654612
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Analysis type:Association
Model tested:Mendelian
Test base:-
Threshold significance level:Significant
LikelihoodR14.20
VARIANCEn/a
P_valuesn/a
LOD_scoren/a
LS_meann/a
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Links:   NCBI GeneDB  |  Edit  |   Map view
User inputs on QTL #19016
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were Norwegian Red cattle.
     Breeds associated:
    Design:Sires were genotyped for 17,349 SNPs using the Affymetrix 25K MIP array and analyzed for DYDs for clinical mastitis and somatic cell score.
    Analysis:Mixed models were used.
    Software:CRIMAP, PHASE, GRIDQTL, ASREML
    Notes: 
    Links:Edit
     Reference
    Authors:Sodeland M, Kent MP, Olsen HG, Opsal MA, Svendsen M, Sehested E, Hayes BJ, Lien S
    Affiliation:Department of Animal and Aquacultural Sciences, Centre for Integrative Genetics, Norwegian University of Life Sciences, N-1432 Aas, Norway
    Title:Quantitative trait loci for clinical mastitis on chromosomes 2, 6, 14 and 20 in Norwegian Red cattle.
    Journal:Animal genetics, 2011, 42(5): 457-65
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  

     Additional Information
    Comments:31-305 days postpartum, lactation 3; DYD
    User inputs on reference #21906097
  • Add your comments
  • Note similar findings
  • Note contradictions

  • Web Access Statistics © 2003-2019 NAGRP - Bioinformatics Coordination Program.
    Contact: NAGRP Bioinformatics Team
    Helpdesk