QTL #181316 Description:

 Trait Information
Trait name: Conception rate Vertebrate Trait Ontology: Fertility trait
Reported name: Product Trait Ontology: n/a
Symbol: CONCRATE Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:14
QTL Peak Location:63.61 (cM)
QTL Span:63.61-63.61 (cM)
47.4-47.4 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs132969548
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Analysis type:Association
Model tested:Mendelian
Test base:Genome-wise
Threshold significance level:Significant
LOD_scoren/a
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene: ()
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were primiparous Holstein cows.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineHD BeadChip and analyzed for fertility traits. A total of 625,093 SNPs were used for analysis.
    Analysis:An efficient mixed-model association eXpedited (EMMAX) model was used for GWAS. Additive, dominant, and recessive models were analyzed for each phenotype.
    Software:SVS v9.1
    Notes: 
    Links:Edit
     Reference
    Authors:Kiser JN, Clancey E, Moraes JGN, Dalton J, Burns GW, Spencer TE, Neibergs HL
    Affiliation:Department of Animal Sciences and Center for Reproductive Biology, Washington State University, Pullman, WA, United States
    Title:Identification of loci associated with conception rate in primiparous Holstein cows
    Journal:BMC genomics, 2019, 20(1): 840
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  

     Additional Information
    Comments:at first breeding; additive and dominant models
    User inputs on reference #31718557
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