QTL #178639 Description:

 Trait Information
Trait name: Milk caproic acid content Vertebrate Trait Ontology: Milk fatty acid C6:0 amount
Reported name: Product Trait Ontology: Milk fatty acid C6:0 content
Symbol: MFA-C6:0 Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:20
QTL Peak Location:43.15 (cM)
QTL Span:43.15-43.15 (cM)
39.1-39.1 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs135164815
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Analysis type:Association
Model tested:Mendelian
Test base:Genome-wise
Threshold significance level:Significant
LOD_scoren/a
P_values<0.0001
Dominance effect:0.0296
Additive effect:0.0667
Associated Gene:PRLR (prolactin receptor)
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #178639
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were Chinese Holstein cows.
     Breeds associated:
    Design:Based on the identification of candidate genes in an earlier GWAS, animals were genotyped for 11 SNPs in 4 genes (PRLR, MOGAT1, MINPP1, and CHUK) and analyzed for milk fatty acid composition.
    Analysis:Regression models were used.
    Software:SAS 9.2
    Notes: 
    Links:Edit
     Reference
    Authors:Shi L, Liu L, Lv X, Ma Z, Yang Y, Li Y, Zhao F, Sun D, Han B
    Affiliation:Department of Animal Genetics, Breeding and Reproduction, College of Animal Science and Technology, China Agricultural University, Beijing, China
    Title:Polymorphisms and genetic effects of PRLR, MOGAT1, MINPP1 and CHUK genes on milk fatty acid traits in Chinese Holstein
    Journal:BMC genetics, 2019, 20(1): 69
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  
    User inputs on reference #31419940
  • Add your comments
  • Note similar findings
  • Note contradictions

  • Web Access Statistics © 2003-2020 NAGRP - Bioinformatics Coordination Program.
    Contact: NAGRP Bioinformatics Team
    Helpdesk