QTL #177873 Description:

 Trait Information
Trait name: Somatic cell score Vertebrate Trait Ontology: Milk somatic cell quantity
Reported name: Product Trait Ontology: Milk somatic cell count
Symbol: SCS Clinical Measurement Ontology: Milk somatic cell score
 QTL Map Information
QTL Peak Location:17.55 (cM)
QTL Span:16.49-18.60 (cM)
9.6-10.8 (Mbp)
Upper, "Suggestive":rs42519133
Upper, "Significant":n/a
Lower, "Significant":n/a
Lower, "Suggestive":rs42112323
Marker type:SNP
Analysis type:QTL
Model tested:Mendelian
Test base:-
Threshold significance level:Suggestive
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Links:   Edit  |   Map view

 Extended information:

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  •  QTL Experiment in Brief
    Animals:Animals were Ayrshire, Holstein, and Jersey dairy cattle.
     Breeds associated:
    Design:Animals were genotyped with or imputed to the Illumina BovineSNP50 BeadChip and analyzed for milk production traits at three different stages of each of the first three lactations.
    Analysis:Genomic best linear unbiased prediction and single-trait random regression test-day models were used.
    Software:postGsf90, PLINK
    Authors:Oliveira H R, Cant J P, Brito L F, Feitosa F L B, Chud T C S, Fonseca P A S, Jamrozik J, Silva F F, Lourenco D A L, Schenkel F S
    Affiliation:Centre for Genetic Improvement of Livestock (CGIL), Department of Animal Biosciences, University of Guelph, Guelph, Ontario, N1G 2W1, Canada
    Title:Genome-wide association for milk production traits and somatic cell score in different lactation stages of Ayrshire, Holstein, and Jersey dairy cattle
    Journal:Journal of dairy science, 2019, 102(9): 8159-8174
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  

     Additional Information
    Comments:Third parity, 96-215 DIM
    User inputs on reference #31301836
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