QTL #174625 Description:

 Trait Information
Trait name: Milk yield Vertebrate Trait Ontology: Milk amount
Reported name: Product Trait Ontology: n/a
Symbol: MY Clinical Measurement Ontology: Milk yield
 QTL Map Information
QTL Peak Location:0.00 (cM)
QTL Span:0.00-0.00 (cM)
3.7-3.7 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:Polymorphic markers
Analysis type:Association
Model tested:Mendelian
Test base:Genome-wise
Threshold significance level:Significant
Dominance effect:n/a
Additive effect:-72.92
Associated Gene:KCNK9 (potassium two pore domain channel subfamily K member 9)
Links:   Edit  |   Map view

 Extended information:

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  •  QTL Experiment in Brief
    Animals:Animals were US Holstein cattle.
     Breeds associated:
    Design:Cows had genotypes for 60,671 SNPs imputed from 18 SNP chips with 2,710 to 60,671 original SNPs. GWAS was performed for production and fertility traits and somatic cell score.
    Analysis:Two methods were used, an approximate generalized least squares analysis, and a Bayesian linear mixed model.
    Software:BOLT-LMM, EPISNP1mpi, SNPEVG
    Authors:Jiang J, Ma L, Prakapenka D, VanRaden PM, Cole JB, Da Y
    Affiliation:Department of Animal Science, University of Minnesota, Saint Paul, MN, United States
    Title:A Large-Scale Genome-Wide Association Study in U.S. Holstein Cattle
    Journal:Frontiers in genetics, 2019, 10: 412
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  

     Additional Information
    Comments:significant additive SNP effects
    User inputs on reference #31139206
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