QTL #172135 Description:

 Trait Information
Trait name: Milk palmitic acid content Vertebrate Trait Ontology: Milk fatty acid C16:0 amount
Reported name: Product Trait Ontology: Milk fatty acid C16:0 content
Symbol: MFA-C16:0 Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:14
QTL Peak Location:0.00 (cM)
QTL Span:0.00-0.00 (cM)
4.2-18.5 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":rs109315697
Peak:rs42305197
Lower, "Significant":rs41719416
Lower, "Suggestive":n/a
Analysis type:QTL
Model tested:Mendelian
Test base:Experiment-wise
Threshold significance level:Significant
LOD_scoren/a
VARIANCE11.2%
Dominance effect:n/a
Additive effect:n/a
Associated Gene: ()
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Chinese, Danish, and Dutch Holstein cattle.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineSNP50 (data imputed to HD) or BovineHD BeadChip and analyzed for milk fatty acid composition. A total of 464,130 SNPs were used for analysis.
    Analysis:A single-SNP association test was implemented using a mixed linear model.
    Software:GCTA
    Notes: 
    Links:Edit
     Reference
    Authors:Gebreyesus G, Buitenhuis A J, Poulsen N A, Visker M H P W, Zhang Q, van Valenberg H J F, Sun D, Bovenhuis H
    Affiliation:Animal Breeding and Genomics, Wageningen University and Research, P.O. Box 338, 6700 AH, Wageningen, the Netherlands
    Title:Multi-population GWAS and enrichment analyses reveal novel genomic regions and promising candidate genes underlying bovine milk fatty acid composition
    Journal:BMC genomics, 2019, 20(1): 178
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  
    User inputs on reference #30841852
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