QTL #169810 Description:

 Trait Information
Trait name: Sexual precocity Vertebrate Trait Ontology: n/a
Reported name: Product Trait Ontology: n/a
Symbol: SPREC Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:14
QTL Peak Location:31.64 (cM)
QTL Span:31.64-31.64 (cM)
23.6-23.6 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs132881564
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Analysis type:Association
Model tested:Mendelian
Test base:Experiment-wise
Threshold significance level:Significant
LOD_scoren/a
P_values1.27E-05
FDR<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Nelore and Brahman beef cattle.
     Breeds associated:
    Design:A multi-trait meta-analysis was carried out for traits related to sexual precocity. Nelore animals were genotyped using the Illumina Bovine HD or GeneSeek Genomic Profiler Indicus (with data imputed to HD), and Brahman animals were genotyped using the Illumina Bovine SNP50 v1 or v2, with data imputed to HD.
    Analysis:A single-trait, single-marker method was used to perform GWAS using a genomic mixed model. Multi-trait meta-analyses were then performed using 387,971 SNPs.
    Software:Beagle, SNP & Variation Suite v8.3.0
    Notes:Traits included in meta-analysis were age at first calving, early pregnancy, age at first corpus luteum, first postpartum anestrus interval, and scrotal circumference.
    Links:Edit
     Reference
    Authors:Melo TP, Fortes MRS, Bresolin T, Mota LFM, Albuquerque LG, Carvalheiro R
    Affiliation:Department of Animal Science, School of Agricultural and Veterinarian Sciences, FCAV/ UNESP - Sao Paulo State University, Jaboticabal, Sao Paulo, Brazil
    Title:Multitrait meta-analysis identified genomic regions associated with sexual precocity in tropical beef cattle
    Journal:Journal of animal science, 2018, 96(10): 4087-4099
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  
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