QTL #168588 Description:

 Trait Information
Trait name: Milk casein index Vertebrate Trait Ontology: Milk casein amount
Reported name: Product Trait Ontology: Milk casein content
Symbol: MCASIND Clinical Measurement Ontology: Milk casein index
 QTL Map Information
Chromosome:9
QTL Peak Location:30.01 (cM)
QTL Span:30.01-30.01 (cM)
27.8-27.8 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs136186903
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Analysis type:Association
Model tested:Mendelian
Test base:Genome-wise
Threshold significance level:Significant
VARIANCEn/a
P_values<0.01
LOD_scoren/a
LS_meann/a
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Links:   Edit  |   Map view
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  •  QTL Experiment in Brief
    Animals:Animals were Chinese Holstein cattle.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineSNP50 BeadChip v1 or v2, with data imputed to HD, and analyzed for milk protein composition traits. A total of 586,304 SNPs were used for analysis.
    Analysis:A single-step genomic BLUP approach was used for GWAS.
    Software:BLUPf90, Beagle
    Notes: 
    Links:Edit
     Reference
    Authors:Zhou C, Li C, Cai W, Liu S, Yin H, Shi S, Zhang Q, Zhang S
    Affiliation:Key Laboratory of Animal Genetics, Breeding and Reproduction, Ministry of Agriculture & National Engineering Laboratory for Animal Breeding, College of Animal Science and Technology, China Agricultural University, Beijing, China
    Title:Genome-Wide Association Study for Milk Protein Composition Traits in a Chinese Holstein Population Using a Single-Step Approach
    Journal:Frontiers in genetics, 2019, 10: 72
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  
    User inputs on reference #30838020
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