| QTL Map Information |
|---|
| Chromosome: | 6 |
| QTL Peak Location: | 34.24 (cM) |
| QTL Span: | 34.24-34.24 (cM)
31.0-31.0 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs133726266 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 9.79E-6 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Irish Holstein-Friesian cows. |
| Breeds associated:
|
| Design: | Animals were genotyped using a variety of panels, with data imputed to the Illumina BovineHD BeadChip, and analyzed for anogenital distance. A total of 648,572 SNPs were used for analysis. |
| Analysis: | Whole-genome association analysis was performed in genome-wide complex trait analysis using a mixed linear model. |
| Software: | FImpute, SAS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Gobikrushanth M, Purfield D C, Kenneally J, Doyle R C, Holden S A, Martinez P M, Canadas E Rojas, Bruinjé T C, Colazo M G, Ambrose D J, Butler S T |
| Affiliation: | Teagasc, Animal & Grassland Research and Innovation Centre, Moorepark, Fermoy, Co. Cork, Ireland, P61 C996 |
| Title: | The relationship between anogenital distance and fertility, and genome-wide associations for anogenital distance in Irish Holstein-Friesian cows. |
| Journal: | Journal of dairy science, 2019, 102(2): 1702-1711 |
| Links: |
PubMed | Abstract | List all data
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