| QTL Map Information |
|---|
| Chromosome: | 22 |
| QTL Peak Location: | 46.64 (cM) |
| QTL Span: | 46.64-46.64 (cM)
31.1-31.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs43709794 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Brown Swiss cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using either the BovineSNP50 BeadChip or BovineHD BeadChip and analyzed for SNP association with a white-spotted phenotype. A total of 37,729 SNPs were used for analysis. |
| Analysis: | A single-SNP univariate mixed linear animal model was used. |
| Software: | snp1101 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Hofstetter S, Seefried F, Häfliger IM, Jagannathan V, Leeb T, Drögemüller C |
| Affiliation: | Institute of Genetics, Vetsuisse Faculty, University of Bern, 3001, Bern, Switzerland |
| Title: | A non-coding regulatory variant in the 5'-region of the MITF gene is associated with white-spotted coat in Brown Swiss cattle |
| Journal: | Animal genetics, 2019, 50(1):27-32 |
| Links: |
PubMed | Abstract | List all data
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