QTL #166554 Description:

 Trait Information
Trait name: Milk fat content Vertebrate Trait Ontology: Milk fat amount
Reported name: Product Trait Ontology: Milk fat content
Symbol: MFATC Clinical Measurement Ontology: Milk fat content
 QTL Map Information
Chromosome:23
QTL Peak Location:40.13 (cM)
QTL Span:40.13-40.13 (cM)
27.6-27.6 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs137102117
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Analysis type:Association
Model tested:Mendelian
Test base:Genome-wise
Threshold significance level:Significant
VARIANCEn/a
P_values<0.05
LOD_scoren/a
LS_meann/a
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Holstein, Montbeliarde, and Normande cows.
     Breeds associated:
    Design:Animals were genotyped using the Illumina Infinium BovineSNP50 BeadChip, BovineLD BeadChip, or EuroG10k SNP chip (all data mputed to 50k) and analyzed for milk production, stature, and fertility traits. A total of 48,576 SNPs were used for analysis.
    Analysis:A mixed linear regression model was used. Analyses were performed within each breed, then meta-analysis was carried out using a weighted Z-score model.
    Software:FImpute, METAL, GCTA
    Notes: 
    Links:Edit
     Reference
    Authors:Marete AG, Guldbrandtsen B, Lund MS, Fritz S, Sahana G, Boichard D
    Affiliation:UMR GABI, INRA, AgroParisTech, Université Paris Saclay, 78350 Jouy en Josas, France
    Title:A Meta-Analysis Including Pre-selected Sequence Variants Associated With Seven Traits in Three French Dairy Cattle Populations
    Journal:Frontiers in genetics, 2018, 9: 522
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  
    User inputs on reference #30459810
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