QTL #164912 Description:

 Trait Information
Trait name: Clinical mastitis Vertebrate Trait Ontology: n/a
Reported name: Product Trait Ontology: n/a
Symbol: CM Clinical Measurement Ontology: Disease incidence/prevalence measurement
 QTL Map Information
QTL Peak Location:57.28 (cM)
QTL Span:57.27-57.29 (cM)
43.7-43.7 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":rs464881101
Lower, "Significant":rs481152763
Lower, "Suggestive":n/a
Marker type:Polymorphic markers
Analysis type:QTL
Model tested:Mendelian
Test base:Genome-wise
Threshold significance level:Significant
Dominance effect:n/a
Additive effect:n/a
Associated Gene: ()
Links:   Edit  |   Map view

 Extended information:

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  •  QTL Experiment in Brief
    Animals:Animals were Holstein, Nordic Red, and Jersey cattle.
     Breeds associated:
    Design:Animals were genotyped using a 50K SNP chip, with data imputed to HD and whole-genome sequence level, and analyzed for milk production, mastitis, health, and fertility traits.
    Analysis:Single-marker GWAS was conducted using a two-step variance component-based method.
    Software:EMMAX, IMPUTE2 v2.3.1
    Authors:Fang L, Sørensen P, Sahana G, Panitz F, Su G, Zhang S, Yu Y, Li B, Ma L, Liu G, Lund MS, Thomsen B
    Affiliation:Section for Molecular Genetics and Systems Biology, Department of Molecular Biology and Genetics, Aarhus University, 8000, Aarhus C, Denmark
    Title:MicroRNA-guided prioritization of genome-wide association signals reveals the importance of microRNA-target gene networks for complex traits in cattle
    Journal:Scientific reports, 2018, 8(1): 9345
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  
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